PDB Entry (5wxs)
PDB ID: 5wxs Resolution: 2.3 Å Exp. Method: X-RAY DIFFRACTION
PMID: - DOI: -
Protein
Protein Name: Urokinase-type plasminogen activator
Uniprot ID/ACC: P00749 (UROK_HUMAN) Organism: Homo sapiens (Human)
Gene Symbol: PLAU Gene ID: 5328
Protein Class: HYDROLASE
Ligand
Ligand Name:   L-Pyroglutamylglycyl-L-arginine-p-nitroanilide
Canonical SMILES:   NC(=N)NCCC[C@H](NC(=O)CNC(=O)[C@@H]1CCC(=O)N1)C(=O)Nc1ccc(cc1)[N+]([O-])=O
Standard InChI:   InChI=1S/C19H26N8O6/c20-19(21)22-9-1-2-13(18(31)24-11-3-5-12(6-4-11)27(32)33)26-16(29)10-23-17(30)14-7-8-15(28)25-14/h3-6,13-14H,1-2,7-10H2,(H,23,30)(H,24,31)(H,25,28)(H,26,29)(H4,20,21,22)/t13-,14-/m0/s1
HET Code:   7YF PubChem:   121898
DrugBank:   - ChEMBL:   -
Molecular Formula:   C19H26N8O6 Mol. Weight:   462.19754 logP:   -1.32383
HBD:   7 HBA:   7
#Rotatable Bonds:   11 TPSA:   221.44
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Nucleophilic Acyl Substitution SER 195 U 14.55 - Amide
Binding Affinity
-