PDB Entry (5mi4) |
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PDB ID: 5mi4 | Resolution: 1.8 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 29163914 | DOI: 10.1039/c7sc01966a | |
Protein |
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Protein Name: O-GlcNAcase BT_4395 | |
Uniprot ID/ACC: Q89ZI2 (OGA_BACTN) | Organism: Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) |
Gene Symbol: BT_4395 | Gene ID: 31618140 |
Protein Class: HYDROLASE |
Ligand |
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Ligand Name: N-(4-ethoxyquinazolin-2-yl)prop-2-enamide | ||
Canonical SMILES: c1cccc(c12)nc(NC(=O)C=C)nc2OCC | ||
Standard InChI: InChI=1S/C13H13N3O2/c1-3-11(17)15-13-14-10-8-6-5-7-9(10)12(16-13)18-4-2/h3,5-8H,1,4H2,2H3,(H,14,15,16,17) | ||
HET Code: 7NQ | PubChem: - | |
DrugBank: - | ChEMBL: - | |
Molecular Formula: C13H13N3O2 | Mol. Weight: 243.10077 | logP: 2.153 |
HBD: 1 | HBA: 4 | |
#Rotatable Bonds: 4 | TPSA: 64.11 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Michael Addition | CYS 550 | A | 58.82 | 10.2 | Vinyl Carbonyl |
Binding Affinity |
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