PDB Entry (5tnh)
PDB ID: 5tnh Resolution: 2.1 Å Exp. Method: X-RAY DIFFRACTION
PMID: 28392259 DOI: 10.1016/j.str.2017.03.002
Protein
Protein Name: Putative hydrolase
Uniprot ID/ACC: A0A0H2ZD27 (A0A0H2ZD27_PSEAB) Organism: Pseudomonas aeruginosa (strain UCBPP-PA14)
Gene Symbol: PA14_26090 Gene ID: -
Protein Class: HYDROLASE
Ligand
Ligand Name:   (±)17,18-epoxy-5Z,8Z,11Z,14Z-eicosatetraenoic acid
Canonical SMILES:   CC[C@H]1O[C@@H]1C\C=C/C\C=C/C\C=C/C\C=C/CCCC(O)=O
Standard InChI:   InChI=1S/C20H30O3/c1-2-18-19(23-18)16-14-12-10-8-6-4-3-5-7-9-11-13-15-17-20(21)22/h3,5-6,8-9,11-12,14,18-19H,2,4,7,10,13,15-17H2,1H3,(H,21,22)/b5-3-,8-6-,11-9-,14-12-/t18-,19-/m1/s1
HET Code:   7MS PubChem:   -
DrugBank:   - ChEMBL:   -
Molecular Formula:   C20H30O3 Mol. Weight:   318.21948 logP:   5.2039
HBD:   1 HBA:   2
#Rotatable Bonds:   13 TPSA:   49.83
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Epoxide Opening ASP 129 C 18.88 9.12 Epoxide
Binding Affinity
-