PDB Entry (3ndg)
PDB ID: 3ndg Resolution: 1.9 Å Exp. Method: X-RAY DIFFRACTION
PMID: - DOI: -
Protein
Protein Name: Beta-lactamase
Uniprot ID/ACC: P9WKD3 (BLAC_MYCTU) Organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Gene Symbol: blaC Gene ID: 45426045
Protein Class: HYDROLASE
Ligand
Ligand Name:   Methicillin
Canonical SMILES:   COc1cccc(OC)c1C(=O)N[C@H](C2=O)[C@H](N23)SC(C)(C)[C@@H]3C([O-])=O
Standard InChI:   InChI=1S/C17H20N2O6S/c1-17(2)12(16(22)23)19-14(21)11(15(19)26-17)18-13(20)10-8(24-3)6-5-7-9(10)25-4/h5-7,11-12,15H,1-4H3,(H,18,20)(H,22,23)/p-1/t11-,12+,15-/m1/s1
HET Code:   7EP PubChem:   23278031
DrugBank:   - ChEMBL:   -
Molecular Formula:   C17H19N2O6S- Mol. Weight:   379.09692 logP:   -0.3856
HBD:   1 HBA:   7
#Rotatable Bonds:   5 TPSA:   108.0
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Beta-Lactam Addition SER 84 A 18.19 - Beta-Lactam
Binding Affinity
-