PDB Entry (2dca) |
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PDB ID: 2dca | Resolution: 2.11 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: - | DOI: - | |
Protein |
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Protein Name: Cathepsin B | |
Uniprot ID/ACC: P07688 (CATB_BOVIN) | Organism: Bos taurus (Bovine) |
Gene Symbol: CTSB | Gene ID: 281105 |
Protein Class: HYDROLASE |
Ligand |
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Ligand Name: CA075 | ||
Canonical SMILES: CCOC(=O)[C@H]1O[C@@H]1C(=O)N[C@@H]([C@@H](C)CC)C(=O)N[C@@H](C)C(O)=O | ||
Standard InChI: InChI=1S/C15H24N2O7/c1-5-7(3)9(12(18)16-8(4)14(20)21)17-13(19)10-11(24-10)15(22)23-6-2/h7-11H,5-6H2,1-4H3,(H,16,18)(H,17,19)(H,20,21)/t7-,8-,9-,10-,11-/m0/s1 | ||
HET Code: 75V | PubChem: 23647358 | |
DrugBank: DB07224 | ChEMBL: CHEMBL1230544 | |
Molecular Formula: C15H24N2O7 | Mol. Weight: 344.15836 | logP: -0.5629 |
HBD: 3 | HBA: 6 | |
#Rotatable Bonds: 9 | TPSA: 134.33 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Epoxide Opening | CYS 29 | A | 16.14 | 14.5 | Epoxide |
Binding Affinity |
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Database Name | Value |
BindingDB | IC50 : 23 nM |