PDB Entry (5lf4)
PDB ID: 5lf4 Resolution: 1.99 Å Exp. Method: X-RAY DIFFRACTION
PMID: 27493187 DOI: 10.1126/science.aaf8993
Protein
Protein Name: Proteasome subunit beta type-6
Uniprot ID/ACC: P28072 (PSB6_HUMAN) Organism: Homo sapiens (Human)
Gene Symbol: PSMB6 Gene ID: 5694
Protein Class: HYDROLASE
Ligand
Ligand Name:   Delanzomib
Canonical SMILES:   CC(C)C[C@@H](B(O)O)NC(=O)[C@H]([C@H](C)O)NC(=O)c1cccc(n1)-c2ccccc2
Standard InChI:   InChI=1S/C21H28BN3O5/c1-13(2)12-18(22(29)30)24-21(28)19(14(3)26)25-20(27)17-11-7-10-16(23-17)15-8-5-4-6-9-15/h4-11,13-14,18-19,26,29-30H,12H2,1-3H3,(H,24,28)(H,25,27)/t14-,18-,19-/m0/s1
HET Code:   6V7 PubChem:   124645820
DrugBank:   - ChEMBL:   -
Molecular Formula:   C21H28BN3O5 Mol. Weight:   413.2122 logP:   0.7707
HBD:   5 HBA:   6
#Rotatable Bonds:   9 TPSA:   131.78
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Borylation THR 2 b 21.19 - Boronic Acid
Binding Affinity
-