PDB Entry (5lck) |
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PDB ID: 5lck | Resolution: 1.89 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 27385078 | DOI: 10.1039/c6mb00367b | |
Protein |
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Protein Name: Mitogen-activated protein kinase 1 | |
Uniprot ID/ACC: P28482 (MK01_HUMAN) | Organism: Homo sapiens (Human) |
Gene Symbol: MAPK1 | Gene ID: 5594 |
Protein Class: TRANSFERASE |
Ligand |
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Ligand Name: N-[2-({2-[(5-methoxypyridin-3-yl)amino]-5-(trifluoromethyl)pyrimidin-4-yl}amino)phenyl]prop-2-enamide | ||
Canonical SMILES: COc1cncc(c1)Nc2ncc(C(F)(F)F)c(n2)Nc3ccccc3NC(=O)C=C | ||
Standard InChI: InChI=1S/C20H17F3N6O2/c1-3-17(30)27-15-6-4-5-7-16(15)28-18-14(20(21,22)23)11-25-19(29-18)26-12-8-13(31-2)10-24-9-12/h3-11H,1H2,2H3,(H,27,30)(H2,25,26,28,29) | ||
HET Code: 6TT | PubChem: 90330990 | |
DrugBank: - | ChEMBL: - | |
Molecular Formula: C20H17F3N6O2 | Mol. Weight: 430.1365 | logP: 4.5107 |
HBD: 3 | HBA: 7 | |
#Rotatable Bonds: 7 | TPSA: 101.06 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Michael Addition | CYS 166 | A | 18.2 | 13.64 | Vinyl Carbonyl |
Binding Affinity |
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Database Name | Value |
PDBBind | IC50 : 8 nM |