PDB Entry (6j1m) |
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PDB ID: 6j1m | Resolution: 2.0 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 31492848 | DOI: 10.1038/s41467-019-11987-z | |
Protein |
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Protein Name: A. acutangulus PKS2 | |
Uniprot ID/ACC: - | Organism: Anisodus acutangulus |
Gene Symbol: - | Gene ID: - |
Protein Class: OXIDOREDUCTASE |
Ligand |
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Ligand Name: 3-oxopentanedioic acid | ||
Canonical SMILES: OC(=O)CC(=O)CC(O)=O | ||
Standard InChI: InChI=1S/C5H6O5/c6-3(1-4(7)8)2-5(9)10/h1-2H2,(H,7,8)(H,9,10) | ||
HET Code: 6JN | PubChem: 68328 | |
DrugBank: - | ChEMBL: - | |
Molecular Formula: C5H6O5 | Mol. Weight: 146.02153 | logP: -0.4951 |
HBD: 2 | HBA: 3 | |
#Rotatable Bonds: 4 | TPSA: 91.67 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Nucleophilic Acyl Substitution | CYS 166 | A | 21.5 | 17.12 | Carboxylic Acid |
Binding Affinity |
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