PDB Entry (6j1m)
PDB ID: 6j1m Resolution: 2.0 Å Exp. Method: X-RAY DIFFRACTION
PMID: 31492848 DOI: 10.1038/s41467-019-11987-z
Protein
Protein Name: A. acutangulus PKS2
Uniprot ID/ACC: - Organism: Anisodus acutangulus
Gene Symbol: - Gene ID: -
Protein Class: OXIDOREDUCTASE
Ligand
Ligand Name:   3-oxopentanedioic acid
Canonical SMILES:   OC(=O)CC(=O)CC(O)=O
Standard InChI:   InChI=1S/C5H6O5/c6-3(1-4(7)8)2-5(9)10/h1-2H2,(H,7,8)(H,9,10)
HET Code:   6JN PubChem:   68328
DrugBank:   - ChEMBL:   -
Molecular Formula:   C5H6O5 Mol. Weight:   146.02153 logP:   -0.4951
HBD:   2 HBA:   3
#Rotatable Bonds:   4 TPSA:   91.67
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Nucleophilic Acyl Substitution CYS 166 A 21.5 17.12 Carboxylic Acid
Binding Affinity
-