PDB Entry (5j7p)
PDB ID: 5j7p Resolution: 1.85 Å Exp. Method: X-RAY DIFFRACTION
PMID: 27156768 DOI: 10.1016/j.bmcl.2016.04.074
Protein
Protein Name: Macrophage migration inhibitory factor
Uniprot ID/ACC: P14174 (MIF_HUMAN) Organism: Homo sapiens (Human)
Gene Symbol: MIF Gene ID: 4282
Protein Class: ISOMERASE
Ligand
Ligand Name:   RDR03785
Canonical SMILES:   O1COc(c12)cc(O)c(c2)[C@H](N3CCOCC3)c4ccc(C(F)(F)F)cc4
Standard InChI:   InChI=1S/C19H18F3NO4/c20-19(21,22)13-3-1-12(2-4-13)18(23-5-7-25-8-6-23)14-9-16-17(10-15(14)24)27-11-26-16/h1-4,9-10,18,24H,5-8,11H2/t18-/m1/s1
HET Code:   6H1 PubChem:   7219354
DrugBank:   - ChEMBL:   -
Molecular Formula:   C19H18F3NO4 Mol. Weight:   381.1188 logP:   3.5613
HBD:   1 HBA:   5
#Rotatable Bonds:   3 TPSA:   51.16
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Nucleophilic Aliphatic Subsititution PRO 1 A 20.77 - Mannich Base
Binding Affinity
Database Name Value
PDBBind Ki : 52 nM