PDB Entry (5i23) |
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PDB ID: 5i23 | Resolution: 1.95 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 27280170 | DOI: 10.1021/acscentsci.6b00057 | |
Protein |
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Protein Name: Oligosaccharide 4-alpha-D-glucosyltransferase | |
Uniprot ID/ACC: B3PEE6 (OL4AG_CELJU) | Organism: Cellvibrio japonicus (strain Ueda107) (Pseudomonas fluorescens subsp. cellulosa) |
Gene Symbol: agd31B | Gene ID: - |
Protein Class: HYDROLASE |
Ligand |
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Ligand Name: CF022 | ||
Canonical SMILES: OC[C@H]1[C@H]2[C@@H]([C@H](O)[C@@H](O)[C@@H]1O)N2CCCCCCCCN=[N+]=[N-] | ||
Standard InChI: InChI=1S/C15H28N4O4/c16-18-17-7-5-3-1-2-4-6-8-19-11-10(9-20)13(21)15(23)14(22)12(11)19/h10-15,20-23H,1-9H2/t10-,11-,12-,13+,14-,15-,19?/m0/s1 | ||
HET Code: 66V | PubChem: - | |
DrugBank: - | ChEMBL: - | |
Molecular Formula: C15H28N4O4 | Mol. Weight: 328.21106 | logP: 0.3949 |
HBD: 4 | HBA: 6 | |
#Rotatable Bonds: 10 | TPSA: 132.69 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Aziridine Opening | ASP 412 | A | 23.16 | 8.42 | Aziridine |
Binding Affinity |
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Database Name | Value |
PDBBind | IC50 : 51.7 nM |