PDB Entry (5i24) |
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PDB ID: 5i24 | Resolution: 1.85 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 27280170 | DOI: 10.1021/acscentsci.6b00057 | |
Protein |
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Protein Name: Oligosaccharide 4-alpha-D-glucosyltransferase | |
Uniprot ID/ACC: B3PEE6 (OL4AG_CELJU) | Organism: Cellvibrio japonicus (strain Ueda107) (Pseudomonas fluorescens subsp. cellulosa) |
Gene Symbol: agd31B | Gene ID: - |
Protein Class: HYDROLASE |
Ligand |
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Ligand Name: CF021 | ||
Canonical SMILES: OC[C@@H]([C@@H]([C@H]12)N2)[C@@H](O)[C@H](O)[C@H]1O | ||
Standard InChI: InChI=1S/C7H13NO4/c9-1-2-3-4(8-3)6(11)7(12)5(2)10/h2-12H,1H2/t2-,3-,4+,5+,6-,7-/m0/s1 | ||
HET Code: 66U | PubChem: - | |
DrugBank: - | ChEMBL: - | |
Molecular Formula: C7H13NO4 | Mol. Weight: 175.08446 | logP: -2.9684 |
HBD: 5 | HBA: 5 | |
#Rotatable Bonds: 1 | TPSA: 102.86 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Aziridine Opening | ASP 412 | A | 21.93 | 8.31 | Aziridine |
Binding Affinity |
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Database Name | Value |
PDBBind | IC50 : 37.8 nM |