PDB Entry (3x1i)
PDB ID: 3x1i Resolution: 2.4 Å Exp. Method: X-RAY DIFFRACTION
PMID: 25785518 DOI: 10.1021/acs.bioconjchem.5b00021
Protein
Protein Name: Peroxisome proliferator-activated receptor gamma
Uniprot ID/ACC: P37231 (PPARG_HUMAN) Organism: Homo sapiens (Human)
Gene Symbol: PPARG Gene ID: 5468
Protein Class: TRANSCRIPTION REGULATOR
Ligand
Ligand Name:   6-oxo-tetracosahexaenoic acid
Canonical SMILES:   CC\C=C/C\C=C/C\C=C/C\C=C/C\C=C\C=C\C(=O)CCCCC(O)=O
Standard InChI:   InChI=1S/C24H34O3/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16-17-20-23(25)21-18-19-22-24(26)27/h3-4,6-7,9-10,12-13,15-17,20H,2,5,8,11,14,18-19,21-22H2,1H3,(H,26,27)/b4-3-,7-6-,10-9-,13-12-,16-15+,20-17+
HET Code:   66B PubChem:   -
DrugBank:   - ChEMBL:   -
Molecular Formula:   C24H34O3 Mol. Weight:   370.2508 logP:   6.5081
HBD:   1 HBA:   2
#Rotatable Bonds:   16 TPSA:   54.37
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Michael Addition CYS 285 A 57.93 14.03 Butadienyl Carbonyl
Binding Affinity
-