PDB Entry (3x1i) |
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PDB ID: 3x1i | Resolution: 2.4 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 25785518 | DOI: 10.1021/acs.bioconjchem.5b00021 | |
Protein |
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Protein Name: Peroxisome proliferator-activated receptor gamma | |
Uniprot ID/ACC: P37231 (PPARG_HUMAN) | Organism: Homo sapiens (Human) |
Gene Symbol: PPARG | Gene ID: 5468 |
Protein Class: TRANSCRIPTION REGULATOR |
Ligand |
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Ligand Name: 6-oxo-tetracosahexaenoic acid | ||
Canonical SMILES: CC\C=C/C\C=C/C\C=C/C\C=C/C\C=C\C=C\C(=O)CCCCC(O)=O | ||
Standard InChI: InChI=1S/C24H34O3/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16-17-20-23(25)21-18-19-22-24(26)27/h3-4,6-7,9-10,12-13,15-17,20H,2,5,8,11,14,18-19,21-22H2,1H3,(H,26,27)/b4-3-,7-6-,10-9-,13-12-,16-15+,20-17+ | ||
HET Code: 66B | PubChem: - | |
DrugBank: - | ChEMBL: - | |
Molecular Formula: C24H34O3 | Mol. Weight: 370.2508 | logP: 6.5081 |
HBD: 1 | HBA: 2 | |
#Rotatable Bonds: 16 | TPSA: 54.37 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Michael Addition | CYS 285 | A | 57.93 | 14.03 | Butadienyl Carbonyl |
Binding Affinity |
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