PDB Entry (5tr4)
PDB ID: 5tr4 Resolution: 2.2 Å Exp. Method: X-RAY DIFFRACTION
PMID: - DOI: -
Protein
Protein Name: Polyubiquitin-B
Uniprot ID/ACC: P0CG53 (UBB_BOVIN) Organism: Bos taurus (Bovine)
Gene Symbol: UBB Gene ID: 281370
Protein Class: LIGASE
Ligand
Ligand Name:   TAK-243
Canonical SMILES:   FC(F)(F)Sc1cc(ccc1)-c(n2)cc(n23)nccc3N[C@@H]4C[C@@H]([C@@H](O)[C@H]4O)COS(=O)(=O)N
Standard InChI:   InChI=1S/C19H20F3N5O5S2/c20-19(21,22)33-12-3-1-2-10(6-12)13-8-16-24-5-4-15(27(16)26-13)25-14-7-11(17(28)18(14)29)9-32-34(23,30)31/h1-6,8,11,14,17-18,25,28-29H,7,9H2,(H2,23,30,31)/t11-,14-,17-,18+/m1/s1
HET Code:   61T PubChem:   71715374
DrugBank:   DB15013 ChEMBL:   CHEMBL4297405
Molecular Formula:   C19H20F3N5O5S2 Mol. Weight:   519.0858 logP:   1.7505
HBD:   4 HBA:   10
#Rotatable Bonds:   7 TPSA:   152.07
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Nucleophilic Acyl Substitution GLY 76 B 20.08 - Sulfamate
Binding Affinity
-