PDB Entry (3x1h)
PDB ID: 3x1h Resolution: 2.3 Å Exp. Method: X-RAY DIFFRACTION
PMID: 25785518 DOI: 10.1021/acs.bioconjchem.5b00021
Protein
Protein Name: Peroxisome proliferator-activated receptor gamma
Uniprot ID/ACC: P37231 (PPARG_HUMAN) Organism: Homo sapiens (Human)
Gene Symbol: PPARG Gene ID: 5468
Protein Class: TRANSCRIPTION REGULATOR
Ligand
Ligand Name:   5-oxo-tricosahexaenoic acid
Canonical SMILES:   CC\C=C/C\C=C\C\C=C/C\C=C\C\C=C\C=C\C(=O)CCCC(O)=O
Standard InChI:   InChI=1S/C23H32O3/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16-17-19-22(24)20-18-21-23(25)26/h3-4,6-7,9-10,12-13,15-17,19H,2,5,8,11,14,18,20-21H2,1H3,(H,25,26)/b4-3-,7-6+,10-9-,13-12+,16-15+,19-17+
HET Code:   5OX PubChem:   -
DrugBank:   - ChEMBL:   -
Molecular Formula:   C23H32O3 Mol. Weight:   356.23514 logP:   6.118
HBD:   1 HBA:   2
#Rotatable Bonds:   15 TPSA:   54.37
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Michael Addition CYS 285 A 48.52 14.56 Butadienyl Carbonyl
Binding Affinity
-