PDB Entry (5e5i) |
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PDB ID: 5e5i | Resolution: 1.7 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: - | DOI: - | |
Protein |
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Protein Name: Ornithine aminotransferase | |
Uniprot ID/ACC: S8EY38 (S8EY38_TOXGM) | Organism: Toxoplasma gondii (strain ATCC 50611 / Me49) |
Gene Symbol: TGME49_269110 | Gene ID: 7894568 |
Protein Class: TRANSFERASE |
Ligand |
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Ligand Name: (5E)-6-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}-4-oxohex-5-enoic acid | ||
Canonical SMILES: Cc1ncc(COP(O)(O)=O)c(\C=C\C(=O)CCC(O)=O)c1O | ||
Standard InChI: InChI=1S/C13H16NO8P/c1-8-13(18)11(4-2-10(15)3-5-12(16)17)9(6-14-8)7-22-23(19,20)21/h2,4,6,18H,3,5,7H2,1H3,(H,16,17)(H2,19,20,21)/b4-2+ | ||
HET Code: 5NJ | PubChem: - | |
DrugBank: - | ChEMBL: - | |
Molecular Formula: C13H16NO8P | Mol. Weight: 345.06134 | logP: 1.15202 |
HBD: 4 | HBA: 6 | |
#Rotatable Bonds: 8 | TPSA: 154.25 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Michael Addition | LYS 286 | A | 29.08 | 9.32 | Vinyl Carbonyl |
Binding Affinity |
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