PDB Entry (5ea9)
PDB ID: 5ea9 Resolution: 1.71 Å Exp. Method: X-RAY DIFFRACTION
PMID: - DOI: -
Protein
Protein Name: Dihydroorotate dehydrogenase (fumarate)
Uniprot ID/ACC: Q4D3W2 (PYRD_TRYCC) Organism: Trypanosoma cruzi (strain CL Brener)
Gene Symbol: pyr4 Gene ID: 3539620
Protein Class: OXIDOREDUCTASE
Ligand
Ligand Name:   5-[(E)-3-thiophen-2-ylprop-2-enylidene]-1,3-diazinane-2,4,6-trione
Canonical SMILES:   O=C1NC(=O)C(=C\C=C\c2cccs2)C(=O)N1
Standard InChI:   InChI=1S/C11H8N2O3S/c14-9-8(10(15)13-11(16)12-9)5-1-3-7-4-2-6-17-7/h1-6H,(H2,12,13,14,15,16)/b3-1+
HET Code:   5LM PubChem:   869810
DrugBank:   - ChEMBL:   -
Molecular Formula:   C11H8N2O3S Mol. Weight:   248.02556 logP:   1.0537
HBD:   2 HBA:   4
#Rotatable Bonds:   2 TPSA:   75.27
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Michael Addition CYS 130 A 37.25 12.53 Vinyl Carbonyl
Binding Affinity
-