PDB Entry (2g8e)
PDB ID: 2g8e Resolution: 2.25 Å Exp. Method: X-RAY DIFFRACTION
PMID: 16768440 DOI: 10.1021/bi060425j
Protein
Protein Name: Calpain-1 catalytic subunit
Uniprot ID/ACC: P97571 (CAN1_RAT) Organism: Rattus norvegicus (Rat)
Gene Symbol: Capn1 Gene ID: 29153
Protein Class: HYDROLASE
Ligand
Ligand Name:   SNJ-1715
Canonical SMILES:   OCC[C@@H](C=O)NC(=O)[C@H](CC(C)C)NC(=S)Nc1ccccc1
Standard InChI:   InChI=1S/C17H25N3O3S/c1-12(2)10-15(16(23)18-14(11-22)8-9-21)20-17(24)19-13-6-4-3-5-7-13/h3-7,11-12,14-15,21H,8-10H2,1-2H3,(H,18,23)(H2,19,20,24)/t14-,15-/m0/s1
HET Code:   0M6 PubChem:   -
DrugBank:   - ChEMBL:   -
Molecular Formula:   C17H25N3O3S Mol. Weight:   351.16165 logP:   1.4538
HBD:   4 HBA:   4
#Rotatable Bonds:   9 TPSA:   90.46
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Hemi(thio)acetalization CYS 115 A 15.54 14.03 Aldehyde
Binding Affinity
-