PDB Entry (5e7r)
PDB ID: 5e7r Resolution: 2.11 Å Exp. Method: X-RAY DIFFRACTION
PMID: 28011204 DOI: 10.1016/j.bmc.2016.11.035
Protein
Protein Name: TGF-beta-activated kinase 1 and MAP3K7-binding protein 1
Uniprot ID/ACC: Q15750 (M3K7_HUMAN) Organism: Homo sapiens (Human)
Gene Symbol: - Gene ID: -
Protein Class: TRANSFERASE
Ligand
Ligand Name:   2-chloro-N-{2-[(5-chloro-2-{[4-(4-methylpiperazin-1-yl)phenyl]amino}pyrimidin-4-yl)oxy]phenyl}acetamide
Canonical SMILES:   CN1CCN(CC1)c1ccc(Nc2ncc(Cl)c(Oc3ccccc3NC(=O)CCl)n2)cc1
Standard InChI:   InChI=1S/C23H24Cl2N6O2/c1-30-10-12-31(13-11-30)17-8-6-16(7-9-17)27-23-26-15-18(25)22(29-23)33-20-5-3-2-4-19(20)28-21(32)14-24/h2-9,15H,10-14H2,1H3,(H,28,32)(H,26,27,29)
HET Code:   5KW PubChem:   132819860
DrugBank:   - ChEMBL:   CHEMBL3883823
Molecular Formula:   C23H24Cl2N6O2 Mol. Weight:   486.1338 logP:   4.595
HBD:   2 HBA:   7
#Rotatable Bonds:   7 TPSA:   82.62
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Nucleophilic Aliphatic Subsititution CYS 174 A 17.58 12.78 Halomethyl Carbonyl
Binding Affinity
Database Name Value
PDBBind IC50 : 25 nM
BindingDB IC50 : 25 nM