PDB Entry (5dp3) |
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PDB ID: 5dp3 | Resolution: 2.05 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 26987809 | DOI: 10.1016/j.bbagen.2016.03.017 | |
Protein |
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Protein Name: Genome polyprotein | |
Uniprot ID/ACC: A9XG43 (A9XG43_HE71) | Organism: Human enterovirus 71 (EV71) (EV-71) |
Gene Symbol: - | Gene ID: - |
Protein Class: HYDROLASE |
Ligand |
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Ligand Name: ethyl (4S)-5-[(3S)-2-oxopyrrolidin-3-yl]-4-[(3-phenylpropanoyl)amino]pent-2-enoate | ||
Canonical SMILES: O=C1NCC[C@H]1C[C@@H](/C=C/C(=O)OCC)NC(=O)CCc2ccccc2 | ||
Standard InChI: InChI=1S/C20H26N2O4/c1-2-26-19(24)11-9-17(14-16-12-13-21-20(16)25)22-18(23)10-8-15-6-4-3-5-7-15/h3-7,9,11,16-17H,2,8,10,12-14H2,1H3,(H,21,25)(H,22,23)/b11-9+/t16-,17+/m0/s1 | ||
HET Code: 5GH | PubChem: - | |
DrugBank: - | ChEMBL: - | |
Molecular Formula: C20H26N2O4 | Mol. Weight: 358.18927 | logP: 1.7495 |
HBD: 2 | HBA: 4 | |
#Rotatable Bonds: 9 | TPSA: 84.5 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Michael Addition | CYS 147 | A | 19.73 | 12.87 | Vinyl Carbonyl |
Binding Affinity |
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