PDB Entry (5dua)
PDB ID: 5dua Resolution: 1.9 Å Exp. Method: X-RAY DIFFRACTION
PMID: 26991102 DOI: 10.1016/j.chembiol.2016.02.012
Protein
Protein Name: CDA peptide synthetase I
Uniprot ID/ACC: Q9Z4X6 (Q9Z4X6_STRCO) Organism: Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Gene Symbol: SCO3230 Gene ID: 1098664
Protein Class: HYDROLASE
Ligand
Ligand Name:   (2S)-2-amino-N-(5-bromopentyl)propanamide
Canonical SMILES:   C[C@H](N)C(=O)NCCCCCBr
Standard InChI:   InChI=1S/C8H17BrN2O/c1-7(10)8(12)11-6-4-2-3-5-9/h7H,2-6,10H2,1H3,(H,11,12)/t7-/m0/s1
HET Code:   5FQ PubChem:   -
DrugBank:   - ChEMBL:   -
Molecular Formula:   C8H17BrN2O Mol. Weight:   236.05243 logP:   1.015
HBD:   2 HBA:   2
#Rotatable Bonds:   6 TPSA:   55.12
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Nucleophilic Aliphatic Subsititution CYS 17 A 43.72 12.97 Alkyl Halide
Binding Affinity
-