PDB Entry (4jmd) |
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PDB ID: 4jmd | Resolution: 1.67 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 23758195 | DOI: 10.1021/bi400397k | |
Protein |
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Protein Name: Uncharacterized protein | |
Uniprot ID/ACC: Q643B8 (Q643B8_STRHY) | Organism: Streptomyces hygroscopicus |
Gene Symbol: mppR | Gene ID: - |
Protein Class: LYASE |
Ligand |
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Ligand Name: 2-oxo-3-(imidazol-5-yl)pyruvate | ||
Canonical SMILES: OC(=O)C(=O)\C=C\c1c[nH]cn1 | ||
Standard InChI: InChI=1S/C7H6N2O3/c10-6(7(11)12)2-1-5-3-8-4-9-5/h1-4H,(H,8,9)(H,11,12)/b2-1+ | ||
HET Code: 4IC | PubChem: - | |
DrugBank: - | ChEMBL: - | |
Molecular Formula: C7H6N2O3 | Mol. Weight: 166.03784 | logP: 0.0766 |
HBD: 2 | HBA: 3 | |
#Rotatable Bonds: 3 | TPSA: 83.05 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Imine Condensation | LYS 156 | A | 8.94 | 7.32 | Ketone |
Binding Affinity |
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