PDB Entry (6v7i) |
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PDB ID: 6v7i | Resolution: 1.25 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 32778546 | DOI: 10.1128/AAC.00398-20 | |
Protein |
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Protein Name: Carbapenem-hydrolyzing beta-lactamase KPC | |
Uniprot ID/ACC: Q9F663 (BLKPC_KLEPN) | Organism: Klebsiella pneumoniae |
Gene Symbol: bla | Gene ID: 56982589 |
Protein Class: HYDROLASE |
Ligand |
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Ligand Name: Vaborbactam | ||
Canonical SMILES: OB1O[C@H](CC(O)=O)CC[C@@H]1NC(=O)Cc1cccs1 | ||
Standard InChI: InChI=1S/C12H16BNO5S/c15-11(7-9-2-1-5-20-9)14-10-4-3-8(6-12(16)17)19-13(10)18/h1-2,5,8,10,18H,3-4,6-7H2,(H,14,15)(H,16,17)/t8-,10-/m0/s1 | ||
HET Code: 4D6 | PubChem: 56649692 | |
DrugBank: DB12107 | ChEMBL: CHEMBL3317857 | |
Molecular Formula: C12H16BNO5S | Mol. Weight: 297.08423 | logP: 0.4488 |
HBD: 3 | HBA: 5 | |
#Rotatable Bonds: 5 | TPSA: 95.86 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Borylation | SER 70 | A | 13.87 | - | Boronic Acid |
Binding Affinity |
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