PDB Entry (4yd4) |
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PDB ID: 4yd4 | Resolution: 1.27 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: - | DOI: - | |
Protein |
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Protein Name: Endothiapepsin | |
Uniprot ID/ACC: P11838 (CARP_CRYPA) | Organism: Cryphonectria parasitica (Chestnut blight fungus) (Endothia parasitica) |
Gene Symbol: EAPA | Gene ID: - |
Protein Class: HYDROLASE |
Ligand |
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Ligand Name: 4-(bromomethyl)benzoic acid | ||
Canonical SMILES: OC(=O)c1ccc(CBr)cc1 | ||
Standard InChI: InChI=1S/C8H7BrO2/c9-5-6-1-3-7(4-2-6)8(10)11/h1-4H,5H2,(H,10,11) | ||
HET Code: 4AY | PubChem: 22599 | |
DrugBank: - | ChEMBL: CHEMBL101846 | |
Molecular Formula: C8H7BrO2 | Mol. Weight: 213.96294 | logP: 2.2797 |
HBD: 1 | HBA: 1 | |
#Rotatable Bonds: 2 | TPSA: 37.3 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Nucleophilic Acyl Substitution | ASP 279 | A | 62.81 | 5.71 | Alkyl Halide |
Binding Affinity |
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