PDB Entry (4yd4)
PDB ID: 4yd4 Resolution: 1.27 Å Exp. Method: X-RAY DIFFRACTION
PMID: - DOI: -
Protein
Protein Name: Endothiapepsin
Uniprot ID/ACC: P11838 (CARP_CRYPA) Organism: Cryphonectria parasitica (Chestnut blight fungus) (Endothia parasitica)
Gene Symbol: EAPA Gene ID: -
Protein Class: HYDROLASE
Ligand
Ligand Name:   4-(bromomethyl)benzoic acid
Canonical SMILES:   OC(=O)c1ccc(CBr)cc1
Standard InChI:   InChI=1S/C8H7BrO2/c9-5-6-1-3-7(4-2-6)8(10)11/h1-4H,5H2,(H,10,11)
HET Code:   4AY PubChem:   22599
DrugBank:   - ChEMBL:   CHEMBL101846
Molecular Formula:   C8H7BrO2 Mol. Weight:   213.96294 logP:   2.2797
HBD:   1 HBA:   1
#Rotatable Bonds:   2 TPSA:   37.3
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Nucleophilic Acyl Substitution ASP 279 A 62.81 5.71 Alkyl Halide
Binding Affinity
-