PDB Entry (5tnd) |
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PDB ID: 5tnd | Resolution: 1.55 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 28392259 | DOI: 10.1016/j.str.2017.03.002 | |
Protein |
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Protein Name: Putative hydrolase | |
Uniprot ID/ACC: A0A0H2ZD27 (A0A0H2ZD27_PSEAB) | Organism: Pseudomonas aeruginosa (strain UCBPP-PA14) |
Gene Symbol: PA14_26090 | Gene ID: - |
Protein Class: HYDROLASE |
Ligand |
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Ligand Name: (1R,2R)-1,2-Epoxycyclohexane | ||
Canonical SMILES: [C@H]12[C@H](O2)CCCC1 | ||
Standard InChI: InChI=1S/C6H10O/c1-2-4-6-5(3-1)7-6/h5-6H,1-4H2/t5-,6-/m1/s1 | ||
HET Code: 40O | PubChem: 11170921 | |
DrugBank: - | ChEMBL: - | |
Molecular Formula: C6H10O | Mol. Weight: 98.073166 | logP: 1.3278 |
HBD: 0 | HBA: 1 | |
#Rotatable Bonds: 0 | TPSA: 12.53 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Epoxide Opening | ASP 129 | C | 17.67 | 9.28 | Epoxide |
Binding Affinity |
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