PDB Entry (4wyy) |
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PDB ID: 4wyy | Resolution: 1.28 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 27622821 | DOI: 10.1021/acsinfecdis.5b00031 | |
Protein |
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Protein Name: Beta-lactamase | |
Uniprot ID/ACC: P24735 (AMPC_PSEAE) | Organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) |
Gene Symbol: ampC | Gene ID: 878149 |
Protein Class: HYDROLASE |
Ligand |
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Ligand Name: [(3R)-1-hydroxy-4,5-dimethyl-6-(pyrazin-2-yloxy)-1,3-dihydro-2,1-benzoxaborol-3-yl]acetic acid | ||
Canonical SMILES: Cc1c2[C@@H](CC(O)=O)OB(O)c2cc(Oc2cnccn2)c1C | ||
Standard InChI: InChI=1S/C15H15BN2O5/c1-8-9(2)15-10(16(21)23-12(15)6-14(19)20)5-11(8)22-13-7-17-3-4-18-13/h3-5,7,12,21H,6H2,1-2H3,(H,19,20)/t12-/m1/s1 | ||
HET Code: 3VT | PubChem: - | |
DrugBank: - | ChEMBL: - | |
Molecular Formula: C15H15BN2O5 | Mol. Weight: 314.1074 | logP: 1.11924 |
HBD: 2 | HBA: 6 | |
#Rotatable Bonds: 4 | TPSA: 101.77 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Borylation | SER 90 | A | 12.87 | - | Boronic Acid |
Binding Affinity |
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Database Name | Value |
PDBBind | IC50 : 1000 nM |