PDB Entry (4wx7)
PDB ID: 4wx7 Resolution: 2.4 Å Exp. Method: X-RAY DIFFRACTION
PMID: 25571794 DOI: 10.1016/j.bmcl.2014.12.057
Protein
Protein Name: Protease
Uniprot ID/ACC: B9A5C1 (B9A5C1_ADE08) Organism: Human adenovirus D serotype 8 (HAdV-8) (Human adenovirus 8)
Gene Symbol: L3 Gene ID: -
Protein Class: HYDROLASE
Ligand
Ligand Name:   N-(cyanomethyl)-2-({3-[2-(3,5-dichlorophenyl)-2-methylpropanoyl]-4-methoxyphenyl}formamido)acetamide
Canonical SMILES:   N#CCNC(=O)CNC(=O)c1ccc(OC)c(c1)C(=O)C(C)(C)c2cc(Cl)cc(Cl)c2
Standard InChI:   InChI=1S/C22H21Cl2N3O4/c1-22(2,14-9-15(23)11-16(24)10-14)20(29)17-8-13(4-5-18(17)31-3)21(30)27-12-19(28)26-7-6-25/h4-5,8-11H,7,12H2,1-3H3,(H,26,28)(H,27,30)
HET Code:   3VJ PubChem:   118720232
DrugBank:   - ChEMBL:   CHEMBL3354492
Molecular Formula:   C22H21Cl2N3O4 Mol. Weight:   461.0909 logP:   3.53208
HBD:   2 HBA:   5
#Rotatable Bonds:   8 TPSA:   108.29
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Nucleophilic Addition to a Triple Bond CYS 122 A 13.86 13.66 Nitrile
Binding Affinity
Database Name Value
PDBBind IC50 : 40 nM