PDB Entry (2zu5) |
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PDB ID: 2zu5 | Resolution: 1.65 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 19144641 | DOI: 10.1074/jbc.M807947200 | |
Protein |
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Protein Name: Replicase polyprotein 1ab | |
Uniprot ID/ACC: P0C6X7 (R1AB_SARS) | Organism: Severe acute respiratory syndrome coronavirus (SARS-CoV) |
Gene Symbol: rep | Gene ID: 1489680 |
Protein Class: HYDROLASE |
Ligand |
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Ligand Name: TG-0205486 | ||
Canonical SMILES: O=C1NCC[C@H]1C[C@@H](/C=C/C(=O)C2CC2)NC(=O)[C@H](CC(C)C)NC(=O)[C@H]([C@@H](C)OC(C)(C)C)NC(=O)OCc3ccccc3 | ||
Standard InChI: InChI=1S/C34H50N4O7/c1-21(2)18-27(31(41)36-26(14-15-28(39)24-12-13-24)19-25-16-17-35-30(25)40)37-32(42)29(22(3)45-34(4,5)6)38-33(43)44-20-23-10-8-7-9-11-23/h7-11,14-15,21-22,24-27,29H,12-13,16-20H2,1-6H3,(H,35,40)(H,36,41)(H,37,42)(H,38,43)/b15-14+/t22-,25+,26-,27+,29+/m1/s1 | ||
HET Code: ZU5 | PubChem: 129662165 | |
DrugBank: - | ChEMBL: - | |
Molecular Formula: C34H50N4O7 | Mol. Weight: 626.3679 | logP: 3.5622 |
HBD: 4 | HBA: 7 | |
#Rotatable Bonds: 16 | TPSA: 151.93 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Michael Addition | CYS 145 | A | 21.84 | 15.05 | Vinyl Carbonyl |
Binding Affinity |
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Database Name | Value |
PDBBind | Ki : 99 nM |