PDB Entry (2hfj) |
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PDB ID: 2hfj | Resolution: 1.95 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 16969372 | DOI: 10.1038/nchembio824 | |
Protein |
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Protein Name: Narbonolide/10-deoxymethynolide synthase PikA4, module 6 | |
Uniprot ID/ACC: Q9ZGI2 (PIKA4_STRVZ) | Organism: Streptomyces venezuelae |
Gene Symbol: pikAIV | Gene ID: - |
Protein Class: HYDROLASE |
Ligand |
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Ligand Name: Diphenyl (3R,4S,5S,7R)-4,8-dihydroxy-3,5,7-trimethyl-2-oxooctylphosphonate | ||
Canonical SMILES: OC[C@H](C)C[C@H](C)[C@H](O)[C@@H](C)C(=O)CP(=O)(Oc1ccccc1)Oc2ccccc2 | ||
Standard InChI: InChI=1S/C23H31O6P/c1-17(15-24)14-18(2)23(26)19(3)22(25)16-30(27,28-20-10-6-4-7-11-20)29-21-12-8-5-9-13-21/h4-13,17-19,23-24,26H,14-16H2,1-3H3/t17-,18+,19+,23+/m1/s1 | ||
HET Code: YML | PubChem: 9543581 | |
DrugBank: - | ChEMBL: CHEMBL1221987 | |
Molecular Formula: C23H31O6P | Mol. Weight: 434.18582 | logP: 4.5582 |
HBD: 2 | HBA: 6 | |
#Rotatable Bonds: 12 | TPSA: 93.06 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Phosphorylation | SER 148 | A | 33.77 | - | Phosphonate |
Binding Affinity |
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