PDB Entry (2jal)
PDB ID: 2jal Resolution: 1.9 Å Exp. Method: X-RAY DIFFRACTION
PMID: 17252125 DOI: 10.1039/B616590G
Protein
Protein Name: Beta-glucosidase A
Uniprot ID/ACC: Q08638 (BGLA_THEMA) Organism: Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)
Gene Symbol: bglA Gene ID: -
Protein Class: HYDROLASE
Ligand
Ligand Name:   cyclophellitol
Canonical SMILES:   [C@H]12[C@H](O1)[C@H](CO)[C@@H](O)[C@H](O)[C@H]2O
Standard InChI:   InChI=1S/C7H12O5/c8-1-2-3(9)4(10)5(11)7-6(2)12-7/h2-11H,1H2/t2-,3-,4+,5-,6-,7+/m1/s1
HET Code:   YLL PubChem:   164227
DrugBank:   - ChEMBL:   CHEMBL35576
Molecular Formula:   C7H12O5 Mol. Weight:   176.06847 logP:   -2.5414
HBD:   4 HBA:   5
#Rotatable Bonds:   1 TPSA:   93.45
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Epoxide Opening GLU 351 A 21.6 - Epoxide
Binding Affinity
Database Name Value
PDBBind Ki : 15000 nM