PDB Entry (4bvg)
PDB ID: 4bvg Resolution: 2.5 Å Exp. Method: X-RAY DIFFRACTION
PMID: 23840057 DOI: 10.1073/pnas.1303628110
Protein
Protein Name: Acetyl-coenzyme A synthetase 2-like, mitochondrial
Uniprot ID/ACC: Q9NUB1 (ACS2L_HUMAN) Organism: Homo sapiens (Human)
Gene Symbol: ACSS1 Gene ID: 84532
Protein Class: HYDROLASE
Ligand
Ligand Name:   O-acetyl-ADP ribose
Canonical SMILES:   CC(=O)O[C@H]1O[C@H](COP(O)(=O)OP(O)(=O)OC[C@H]2O[C@H]([C@H](O)[C@@H]2O)n2cnc3c(N)ncnc23)[C@@H](O)[C@H]1O
Standard InChI:   InChI=1S/C17H25N5O15P2/c1-6(23)34-17-13(27)11(25)8(36-17)3-33-39(30,31)37-38(28,29)32-2-7-10(24)12(26)16(35-7)22-5-21-9-14(18)19-4-20-15(9)22/h4-5,7-8,10-13,16-17,24-27H,2-3H2,1H3,(H,28,29)(H,30,31)(H2,18,19,20)/t7-,8-,10-,11-,12-,13-,16-,17+/m1/s1
HET Code:   XYQ PubChem:   49867878
DrugBank:   - ChEMBL:   CHEMBL1236876
Molecular Formula:   C17H25N5O15P2 Mol. Weight:   601.0822 logP:   -2.7119
HBD:   7 HBA:   18
#Rotatable Bonds:   10 TPSA:   297.59
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Imine Condensation LYS 0 B 8.83 - Ketone
Binding Affinity
-