PDB Entry (2v6n) |
||
| ||
PDB ID: 2v6n | Resolution: 1.98 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 18559270 | DOI: 10.1016/J.CHEMBIOL.2008.04.011 | |
Protein |
|
Protein Name: Replicase polyprotein 1ab | |
Uniprot ID/ACC: P0C6X7 (R1AB_SARS) | Organism: Severe acute respiratory syndrome coronavirus (SARS-CoV) |
Gene Symbol: rep | Gene ID: 1489680 |
Protein Class: HYDROLASE |
Ligand |
||
Ligand Name: 4-(DIMETHYLAMINO)BENZOIC ACID | ||
Canonical SMILES: CN(C)c1ccc(cc1)C(O)=O | ||
Standard InChI: InChI=1S/C9H11NO2/c1-10(2)8-5-3-7(4-6-8)9(11)12/h3-6H,1-2H3,(H,11,12) | ||
HET Code: XP1 | PubChem: 12092 | |
DrugBank: DB08748 | ChEMBL: CHEMBL112322 | |
Molecular Formula: C9H11NO2 | Mol. Weight: 165.07898 | logP: 1.4508 |
HBD: 1 | HBA: 2 | |
#Rotatable Bonds: 2 | TPSA: 40.54 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Nucleophilic Acyl Substitution | CYS 145 | A | 26.03 | 13.34 | Carboxylic Acid |
Binding Affinity |
|
Database Name | Value |
PDBBind | Ki : 1380 nM |