PDB Entry (3n8s)
PDB ID: 3n8s Resolution: 2.0 Å Exp. Method: X-RAY DIFFRACTION
PMID: 20961112 DOI: 10.1021/bi1015088
Protein
Protein Name: Beta-lactamase
Uniprot ID/ACC: P9WKD3 (BLAC_MYCTU) Organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Gene Symbol: blaC Gene ID: 45426045
Protein Class: HYDROLASE
Ligand
Ligand Name:   Cefamandole
Canonical SMILES:   Cn1nnnc1SCC1=C(N2[C@H](SC1)[C@H](NC(=O)[C@H](O)c1ccccc1)C2=O)C(O)=O
Standard InChI:   InChI=1S/C18H18N6O5S2/c1-23-18(20-21-22-23)31-8-10-7-30-16-11(15(27)24(16)12(10)17(28)29)19-14(26)13(25)9-5-3-2-4-6-9/h2-6,11,13,16,25H,7-8H2,1H3,(H,19,26)(H,28,29)/t11-,13-,16-/m1/s1
HET Code:   XD2 PubChem:   456255
DrugBank:   DB01326 ChEMBL:   CHEMBL1146
Molecular Formula:   C18H18N6O5S2 Mol. Weight:   462.078 logP:   -0.2256
HBD:   3 HBA:   10
#Rotatable Bonds:   7 TPSA:   150.54
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Beta-Lactam Addition SER 84 A 15.28 - Beta-Lactam
Binding Affinity
-