PDB Entry (5mmv)
PDB ID: 5mmv Resolution: 2.15 Å Exp. Method: X-RAY DIFFRACTION
PMID: - DOI: -
Protein
Protein Name: Caspase-1
Uniprot ID/ACC: P29466 (CASP1_HUMAN) Organism: Homo sapiens (Human)
Gene Symbol: CASP1 Gene ID: 834
Protein Class: HYDROLASE
Ligand
Ligand Name:   2-((2-naphthoyl)-L-valyl)-4-hydroxy-N-((3S)-2-hydroxy-5-oxotetrahydrofuran-3-yl)-2-azabicyclo[2.2.2]octane-3-carboxamide
Canonical SMILES:   c1cccc(c12)ccc(c2)C(=O)N[C@@H](C(C)C)C(=O)N([C@@H](CC3)CC[C@@]34O)[C@H]4C(=O)N[C@H]5CC(=O)O[C@@H]5O
Standard InChI:   InChI=1S/C28H33N3O7/c1-15(2)22(30-24(33)18-8-7-16-5-3-4-6-17(16)13-18)26(35)31-19-9-11-28(37,12-10-19)23(31)25(34)29-20-14-21(32)38-27(20)36/h3-8,13,15,19-20,22-23,27,36-37H,9-12,14H2,1-2H3,(H,29,34)(H,30,33)/t19?,20-,22-,23-,27-,28?/m0/s1
HET Code:   WE0 PubChem:   -
DrugBank:   - ChEMBL:   -
Molecular Formula:   C28H33N3O7 Mol. Weight:   523.2319 logP:   1.2288
HBD:   4 HBA:   7
#Rotatable Bonds:   6 TPSA:   145.27
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Lactone Addition CYS 285 A 27.89 11.86 Gamma-Lactone
Binding Affinity
-