PDB Entry (5ogr) |
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PDB ID: 5ogr | Resolution: 1.55 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 33175511 | DOI: 10.1021/acsinfecdis.0c00501 | |
Protein |
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Protein Name: Cathepsin B1 isotype 1 | |
Uniprot ID/ACC: Q8MNY2 (Q8MNY2_SCHMA) | Organism: Schistosoma mansoni (Blood fluke) |
Gene Symbol: cb1.1 | Gene ID: 8355619 |
Protein Class: HYDROLASE |
Ligand |
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Ligand Name: WRR286 | ||
Canonical SMILES: CN1CCN(CC1)C(=O)N[C@@H](Cc1ccccc1)C(=O)N[C@@H](CCc1ccccc1)\C=C\S(=O)(=O)NOCc1ccccc1 | ||
Standard InChI: InChI=1S/C33H41N5O5S/c1-37-20-22-38(23-21-37)33(40)35-31(25-28-13-7-3-8-14-28)32(39)34-30(18-17-27-11-5-2-6-12-27)19-24-44(41,42)36-43-26-29-15-9-4-10-16-29/h2-16,19,24,30-31,36H,17-18,20-23,25-26H2,1H3,(H,34,39)(H,35,40)/b24-19+/t30-,31-/m0/s1 | ||
HET Code: VS4 | PubChem: 10348912 | |
DrugBank: - | ChEMBL: CHEMBL328080 | |
Molecular Formula: C33H41N5O5S | Mol. Weight: 619.28284 | logP: 3.2372 |
HBD: 3 | HBA: 6 | |
#Rotatable Bonds: 14 | TPSA: 120.08 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Michael Addition | CYS 100 | A | 17.35 | 12.81 | Vinyl Sulfonyl |
Binding Affinity |
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