PDB Entry (5ogr)
PDB ID: 5ogr Resolution: 1.55 Å Exp. Method: X-RAY DIFFRACTION
PMID: 33175511 DOI: 10.1021/acsinfecdis.0c00501
Protein
Protein Name: Cathepsin B1 isotype 1
Uniprot ID/ACC: Q8MNY2 (Q8MNY2_SCHMA) Organism: Schistosoma mansoni (Blood fluke)
Gene Symbol: cb1.1 Gene ID: 8355619
Protein Class: HYDROLASE
Ligand
Ligand Name:   WRR286
Canonical SMILES:   CN1CCN(CC1)C(=O)N[C@@H](Cc1ccccc1)C(=O)N[C@@H](CCc1ccccc1)\C=C\S(=O)(=O)NOCc1ccccc1
Standard InChI:   InChI=1S/C33H41N5O5S/c1-37-20-22-38(23-21-37)33(40)35-31(25-28-13-7-3-8-14-28)32(39)34-30(18-17-27-11-5-2-6-12-27)19-24-44(41,42)36-43-26-29-15-9-4-10-16-29/h2-16,19,24,30-31,36H,17-18,20-23,25-26H2,1H3,(H,34,39)(H,35,40)/b24-19+/t30-,31-/m0/s1
HET Code:   VS4 PubChem:   10348912
DrugBank:   - ChEMBL:   CHEMBL328080
Molecular Formula:   C33H41N5O5S Mol. Weight:   619.28284 logP:   3.2372
HBD:   3 HBA:   6
#Rotatable Bonds:   14 TPSA:   120.08
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Michael Addition CYS 100 A 17.35 12.81 Vinyl Sulfonyl
Binding Affinity
-