PDB Entry (6xr3)
PDB ID: 6xr3 Resolution: 1.45 Å Exp. Method: X-RAY DIFFRACTION
PMID: - DOI: -
Protein
Protein Name: Replicase polyprotein 1ab
Uniprot ID/ACC: P0DTD1 (R1AB_SARS2) Organism: Severe acute respiratory syndrome coronavirus 2 (2019-nCoV) (SARS-CoV-2)
Gene Symbol: rep Gene ID: 43740578
Protein Class: HYDROLASE
Ligand
Ligand Name:   GRL-024-20
Canonical SMILES:   COc1cccc(c12)[nH]c(c2)C(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](C[C@@H]3CCNC3=O)C(=O)c(s4)nc(c45)cccc5
Standard InChI:   InChI=1S/C30H33N5O5S/c1-16(2)13-22(34-29(39)23-15-18-19(32-23)8-6-9-24(18)40-3)28(38)33-21(14-17-11-12-31-27(17)37)26(36)30-35-20-7-4-5-10-25(20)41-30/h4-10,15-17,21-22,32H,11-14H2,1-3H3,(H,31,37)(H,33,38)(H,34,39)/t17-,21-,22-/m0/s1
HET Code:   V7G PubChem:   72708377
DrugBank:   - ChEMBL:   CHEMBL2435614
Molecular Formula:   C30H33N5O5S Mol. Weight:   575.2202 logP:   3.8246
HBD:   4 HBA:   7
#Rotatable Bonds:   11 TPSA:   142.28
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Hemi(thio)acetalization CYS 145 A 28.43 15.15 Ketone
Binding Affinity
-