PDB Entry (6xfn) |
||
| ||
PDB ID: 6xfn | Resolution: 1.7 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 33158912 | DOI: 10.1126/sciadv.abe0751 | |
Protein |
|
Protein Name: Replicase polyprotein 1ab | |
Uniprot ID/ACC: P0DTD1 (R1AB_SARS2) | Organism: Severe acute respiratory syndrome coronavirus 2 (2019-nCoV) (SARS-CoV-2) |
Gene Symbol: rep | Gene ID: 43740578 |
Protein Class: HYDROLASE |
Ligand |
||
Ligand Name: UAW243 | ||
Canonical SMILES: c1cccnc1CNC(=O)C(=O)[C@H](CCC)NC(=O)[C@H](CC(C)C)NC(=O)Oc2ccccc2 | ||
Standard InChI: InChI=1S/C25H32N4O5/c1-4-10-20(22(30)24(32)27-16-18-11-8-9-14-26-18)28-23(31)21(15-17(2)3)29-25(33)34-19-12-6-5-7-13-19/h5-9,11-14,17,20-21H,4,10,15-16H2,1-3H3,(H,27,32)(H,28,31)(H,29,33)/t20-,21-/m0/s1 | ||
HET Code: V1V | PubChem: - | |
DrugBank: - | ChEMBL: - | |
Molecular Formula: C25H32N4O5 | Mol. Weight: 468.23727 | logP: 2.7551 |
HBD: 3 | HBA: 6 | |
#Rotatable Bonds: 12 | TPSA: 126.49 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Hemi(thio)acetalization | CYS 145 | A | 14.53 | 13.99 | Ketone |
Binding Affinity |
||
- |