PDB Entry (5rhc) |
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PDB ID: 5rhc | Resolution: 1.58 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 33028810 | DOI: 10.1038/s41467-020-18709-w | |
Protein |
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Protein Name: Replicase polyprotein 1ab | |
Uniprot ID/ACC: P0DTD1 (R1AB_SARS2) | Organism: Severe acute respiratory syndrome coronavirus 2 (2019-nCoV) (SARS-CoV-2) |
Gene Symbol: rep | Gene ID: 43740578 |
Protein Class: HYDROLASE |
Ligand |
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Ligand Name: Cov_HetLib053 | ||
Canonical SMILES: N#Cc1ncc[nH]1 | ||
Standard InChI: InChI=1S/C4H3N3/c5-3-4-6-1-2-7-4/h1-2H,(H,6,7) | ||
HET Code: USA | PubChem: 564456 | |
DrugBank: - | ChEMBL: CHEMBL4582852 | |
Molecular Formula: C4H3N3 | Mol. Weight: 93.0327 | logP: 0.28138 |
HBD: 1 | HBA: 2 | |
#Rotatable Bonds: 0 | TPSA: 52.47 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Nucleophilic Addition to a Triple Bond | CYS 145 | A | 23.0 | 11.59 | Nitrile |
Binding Affinity |
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