PDB Entry (3khu) |
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PDB ID: 3khu | Resolution: 2.3 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 22123821 | DOI: 10.1074/jbc.M111.313015 | |
Protein |
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Protein Name: UDP-glucose 6-dehydrogenase | |
Uniprot ID/ACC: O60701 (UGDH_HUMAN) | Organism: Homo sapiens (Human) |
Gene Symbol: UGDH | Gene ID: 7358 |
Protein Class: OXIDOREDUCTASE |
Ligand |
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Ligand Name: UDP-Glc | ||
Canonical SMILES: OC[C@H]1O[C@H](OP(O)(=O)OP(O)(=O)OC[C@H]2O[C@H]([C@H](O)[C@@H]2O)n2ccc(=O)[nH]c2=O)[C@H](O)[C@@H](O)[C@@H]1O | ||
Standard InChI: InChI=1S/C15H24N2O17P2/c18-3-5-8(20)10(22)12(24)14(32-5)33-36(28,29)34-35(26,27)30-4-6-9(21)11(23)13(31-6)17-2-1-7(19)16-15(17)25/h1-2,5-6,8-14,18,20-24H,3-4H2,(H,26,27)(H,28,29)(H,16,19,25)/t5-,6-,8-,9-,10+,11-,12-,13-,14-/m1/s1 | ||
HET Code: UPG | PubChem: 8629 | |
DrugBank: DB01861 | ChEMBL: CHEMBL375951 | |
Molecular Formula: C15H24N2O17P2 | Mol. Weight: 566.055 | logP: -4.7937 |
HBD: 9 | HBA: 16 | |
#Rotatable Bonds: 9 | TPSA: 296.99 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Composite Reaction | CYS 276 | E | 55.52 | 9.95 | Hemiacetal |
Binding Affinity |
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