PDB Entry (5rh7)
PDB ID: 5rh7 Resolution: 1.71 Å Exp. Method: X-RAY DIFFRACTION
PMID: - DOI: -
Protein
Protein Name: Replicase polyprotein 1ab
Uniprot ID/ACC: P0DTD1 (R1AB_SARS2) Organism: Severe acute respiratory syndrome coronavirus 2 (2019-nCoV) (SARS-CoV-2)
Gene Symbol: rep Gene ID: 43740578
Protein Class: HYDROLASE
Ligand
Ligand Name:   Z4439011584
Canonical SMILES:   CCc1cccc(C)c1NC(=O)[C@H](N(C(=O)C=C)c2cc([nH]n2)C(C)(C)C)c3cccnc3
Standard InChI:   InChI=1S/C26H31N5O2/c1-7-18-12-9-11-17(3)23(18)28-25(33)24(19-13-10-14-27-16-19)31(22(32)8-2)21-15-20(29-30-21)26(4,5)6/h8-16,24H,2,7H2,1,3-6H3,(H,28,33)(H,29,30)/t24-/m1/s1
HET Code:   UJ1 PubChem:   -
DrugBank:   - ChEMBL:   -
Molecular Formula:   C26H31N5O2 Mol. Weight:   445.24777 logP:   4.87202
HBD:   2 HBA:   4
#Rotatable Bonds:   7 TPSA:   90.98
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Michael Addition CYS 145 A 22.16 13.74 Vinyl Carbonyl
Binding Affinity
-