PDB Entry (5rh5)
PDB ID: 5rh5 Resolution: 1.72 Å Exp. Method: X-RAY DIFFRACTION
PMID: - DOI: -
Protein
Protein Name: Replicase polyprotein 1ab
Uniprot ID/ACC: P0DTD1 (R1AB_SARS2) Organism: Severe acute respiratory syndrome coronavirus 2 (2019-nCoV) (SARS-CoV-2)
Gene Symbol: rep Gene ID: 43740578
Protein Class: HYDROLASE
Ligand
Ligand Name:   Z4439011520
Canonical SMILES:   COc1ccc(c(C)c1)NC(=O)[C@H](N(C(=O)C=C)c2cc(on2)C(C)(C)C)c3cccnc3
Standard InChI:   InChI=1S/C25H28N4O4/c1-7-22(30)29(21-14-20(33-28-21)25(3,4)5)23(17-9-8-12-26-15-17)24(31)27-19-11-10-18(32-6)13-16(19)2/h7-15,23H,1H2,2-6H3,(H,27,31)/t23-/m1/s1
HET Code:   UHV PubChem:   -
DrugBank:   - ChEMBL:   -
Molecular Formula:   C25H28N4O4 Mol. Weight:   448.21106 logP:   4.58312
HBD:   1 HBA:   6
#Rotatable Bonds:   7 TPSA:   97.56
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Michael Addition CYS 145 A 21.86 13.73 Vinyl Carbonyl
Binding Affinity
-