PDB Entry (5rgt)
PDB ID: 5rgt Resolution: 2.22 Å Exp. Method: X-RAY DIFFRACTION
PMID: - DOI: -
Protein
Protein Name: Replicase polyprotein 1ab
Uniprot ID/ACC: P0DTD1 (R1AB_SARS2) Organism: Severe acute respiratory syndrome coronavirus 2 (2019-nCoV) (SARS-CoV-2)
Gene Symbol: rep Gene ID: 43740578
Protein Class: HYDROLASE
Ligand
Ligand Name:   Z4439011607
Canonical SMILES:   c1ccncc1[C@H](C(=O)NC(C)(C)C)N(C(=O)C=C)c2cc(on2)C(C)(C)C
Standard InChI:   InChI=1S/C21H28N4O3/c1-8-17(26)25(16-12-15(28-24-16)20(2,3)4)18(14-10-9-11-22-13-14)19(27)23-21(5,6)7/h8-13,18H,1H2,2-7H3,(H,23,27)/t18-/m1/s1
HET Code:   UHS PubChem:   -
DrugBank:   - ChEMBL:   -
Molecular Formula:   C21H28N4O3 Mol. Weight:   384.21616 logP:   3.5421
HBD:   1 HBA:   5
#Rotatable Bonds:   5 TPSA:   88.33
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Michael Addition CYS 145 A 20.16 13.5 Vinyl Carbonyl
Binding Affinity
-