PDB Entry (1tsn) |
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PDB ID: 1tsn | Resolution: 2.2 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 9109668 | DOI: 10.1021/bi962936j | |
Protein |
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Protein Name: Thymidylate synthase | |
Uniprot ID/ACC: P0A884 (TYSY_ECOLI) | Organism: Escherichia coli (strain K12) |
Gene Symbol: thyA | Gene ID: 58461970 |
Protein Class: TRANSFERASE |
Ligand |
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Ligand Name: 5-FLUORO-2'-DEOXY-UMP | ||
Canonical SMILES: O[C@H]1C[C@@H](O[C@@H]1COP(O)(O)=O)n1cc(F)c(=O)[nH]c1=O | ||
Standard InChI: InChI=1S/C9H12FN2O8P/c10-4-2-12(9(15)11-8(4)14)7-1-5(13)6(20-7)3-19-21(16,17)18/h2,5-7,13H,1,3H2,(H,11,14,15)(H2,16,17,18)/t5-,6+,7+/m0/s1 | ||
HET Code: UFP | PubChem: 8642 | |
DrugBank: DB03761 | ChEMBL: CHEMBL886 | |
Molecular Formula: C9H12FN2O8P | Mol. Weight: 326.03152 | logP: -1.5666 |
HBD: 4 | HBA: 7 | |
#Rotatable Bonds: 4 | TPSA: 151.08 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Nucleophilic Aromatic Substitution | CYS 146 | A | 33.5 | 13.0 | Aryl Halide |
Binding Affinity |
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Database Name | Value |
BindingDB | Ki : 10 nM |