PDB Entry (5rew) |
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PDB ID: 5rew | Resolution: 1.55 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 33028810 | DOI: 10.1038/s41467-020-18709-w | |
Protein |
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Protein Name: Replicase polyprotein 1ab | |
Uniprot ID/ACC: P0DTD1 (R1AB_SARS2) | Organism: Severe acute respiratory syndrome coronavirus 2 (2019-nCoV) (SARS-CoV-2) |
Gene Symbol: rep | Gene ID: 43740578 |
Protein Class: HYDROLASE |
Ligand |
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Ligand Name: PCM-0102275 | ||
Canonical SMILES: ClCC(=O)N[C@@H](C)c1cccc(c12)cccc2 | ||
Standard InChI: InChI=1S/C14H14ClNO/c1-10(16-14(17)9-15)12-8-4-6-11-5-2-3-7-13(11)12/h2-8,10H,9H2,1H3,(H,16,17)/t10-/m0/s1 | ||
HET Code: T4M | PubChem: 9167283 | |
DrugBank: - | ChEMBL: - | |
Molecular Formula: C14H14ClNO | Mol. Weight: 247.07639 | logP: 3.2558 |
HBD: 1 | HBA: 1 | |
#Rotatable Bonds: 3 | TPSA: 29.1 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Nucleophilic Aliphatic Subsititution | CYS 145 | A | 26.0 | 13.51 | Halomethyl Carbonyl |
Binding Affinity |
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