PDB Entry (5rew)
PDB ID: 5rew Resolution: 1.55 Å Exp. Method: X-RAY DIFFRACTION
PMID: 33028810 DOI: 10.1038/s41467-020-18709-w
Protein
Protein Name: Replicase polyprotein 1ab
Uniprot ID/ACC: P0DTD1 (R1AB_SARS2) Organism: Severe acute respiratory syndrome coronavirus 2 (2019-nCoV) (SARS-CoV-2)
Gene Symbol: rep Gene ID: 43740578
Protein Class: HYDROLASE
Ligand
Ligand Name:   PCM-0102275
Canonical SMILES:   ClCC(=O)N[C@@H](C)c1cccc(c12)cccc2
Standard InChI:   InChI=1S/C14H14ClNO/c1-10(16-14(17)9-15)12-8-4-6-11-5-2-3-7-13(11)12/h2-8,10H,9H2,1H3,(H,16,17)/t10-/m0/s1
HET Code:   T4M PubChem:   9167283
DrugBank:   - ChEMBL:   -
Molecular Formula:   C14H14ClNO Mol. Weight:   247.07639 logP:   3.2558
HBD:   1 HBA:   1
#Rotatable Bonds:   3 TPSA:   29.1
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Nucleophilic Aliphatic Subsititution CYS 145 A 26.0 13.51 Halomethyl Carbonyl
Binding Affinity
-