PDB Entry (1ai8)
PDB ID: 1ai8 Resolution: 1.85 Å Exp. Method: X-RAY DIFFRACTION
PMID: 1304349 DOI: -
Protein
Protein Name: Prothrombin
Uniprot ID/ACC: P00734 (THRB_HUMAN) Organism: Homo sapiens (Human)
Gene Symbol: F2 Gene ID: 2147
Protein Class: HYDROLASE
Ligand
Ligand Name:   PHCH2OCO-D-DPA-PRO-BOROMPG
Canonical SMILES:   COCCC[C@H](NC(=O)c1cccn1C(=O)[C@H](NC(=O)N1CCOCC1)C(c1ccccc1)c1ccccc1)B(O)O
Standard InChI:   InChI=1S/C30H37BN4O7/c1-41-19-9-15-25(31(39)40)32-28(36)24-14-8-16-35(24)29(37)27(33-30(38)34-17-20-42-21-18-34)26(22-10-4-2-5-11-22)23-12-6-3-7-13-23/h2-8,10-14,16,25-27,39-40H,9,15,17-21H2,1H3,(H,32,36)(H,33,38)/t25-,27+/m0/s1
HET Code:   T42 PubChem:   -
DrugBank:   - ChEMBL:   -
Molecular Formula:   C30H37BN4O7 Mol. Weight:   576.2755 logP:   1.9078
HBD:   4 HBA:   8
#Rotatable Bonds:   12 TPSA:   142.36
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Borylation SER 195 H 17.31 - Boronic Acid
Binding Affinity
-