PDB Entry (1ai8) |
||
| ||
PDB ID: 1ai8 | Resolution: 1.85 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 1304349 | DOI: - | |
Protein |
|
Protein Name: Prothrombin | |
Uniprot ID/ACC: P00734 (THRB_HUMAN) | Organism: Homo sapiens (Human) |
Gene Symbol: F2 | Gene ID: 2147 |
Protein Class: HYDROLASE |
Ligand |
||
Ligand Name: PHCH2OCO-D-DPA-PRO-BOROMPG | ||
Canonical SMILES: COCCC[C@H](NC(=O)c1cccn1C(=O)[C@H](NC(=O)N1CCOCC1)C(c1ccccc1)c1ccccc1)B(O)O | ||
Standard InChI: InChI=1S/C30H37BN4O7/c1-41-19-9-15-25(31(39)40)32-28(36)24-14-8-16-35(24)29(37)27(33-30(38)34-17-20-42-21-18-34)26(22-10-4-2-5-11-22)23-12-6-3-7-13-23/h2-8,10-14,16,25-27,39-40H,9,15,17-21H2,1H3,(H,32,36)(H,33,38)/t25-,27+/m0/s1 | ||
HET Code: T42 | PubChem: - | |
DrugBank: - | ChEMBL: - | |
Molecular Formula: C30H37BN4O7 | Mol. Weight: 576.2755 | logP: 1.9078 |
HBD: 4 | HBA: 8 | |
#Rotatable Bonds: 12 | TPSA: 142.36 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Borylation | SER 195 | H | 17.31 | - | Boronic Acid |
Binding Affinity |
||
- |