PDB Entry (1a3b)
PDB ID: 1a3b Resolution: 1.8 Å Exp. Method: X-RAY DIFFRACTION
PMID: 9772168 DOI: 10.1021/bi980225a
Protein
Protein Name: Prothrombin
Uniprot ID/ACC: P00734 (THRB_HUMAN) Organism: Homo sapiens (Human)
Gene Symbol: F2 Gene ID: 2147
Protein Class: HYDROLASE
Ligand
Ligand Name:   TRI166
Canonical SMILES:   CCC(=O)N[C@H](Cc1ccccc1)C(=O)N1CCC[C@H]1C(=O)N[C@@H](CCCSC(N)=N)B(O)O
Standard InChI:   InChI=1S/C22H34BN5O5S/c1-2-19(29)26-16(14-15-8-4-3-5-9-15)21(31)28-12-6-10-17(28)20(30)27-18(23(32)33)11-7-13-34-22(24)25/h3-5,8-9,16-18,32-33H,2,6-7,10-14H2,1H3,(H3,24,25)(H,26,29)(H,27,30)/t16-,17+,18+/m1/s1
HET Code:   T29 PubChem:   49867709
DrugBank:   - ChEMBL:   CHEMBL1236135
Molecular Formula:   C22H34BN5O5S Mol. Weight:   491.23737 logP:   0.01857
HBD:   6 HBA:   7
#Rotatable Bonds:   12 TPSA:   168.84
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Borylation SER 195 H 18.08 - Boronic Acid
Binding Affinity
-