PDB Entry (1a3e)
PDB ID: 1a3e Resolution: 1.85 Å Exp. Method: X-RAY DIFFRACTION
PMID: 9772168 DOI: 10.1021/bi980225a
Protein
Protein Name: Prothrombin
Uniprot ID/ACC: P00734 (THRB_HUMAN) Organism: Homo sapiens (Human)
Gene Symbol: F2 Gene ID: 2147
Protein Class: HYDROLASE
Ligand
Ligand Name:   BOROLOG2
Canonical SMILES:   BrC(Br)CC[C@@H](B(O)O)NC(=O)[C@@H]1CCCN1C(=O)[C@@H](NC(=O)CCCC=O)Cc2ccccc2
Standard InChI:   InChI=1S/C23H32BBr2N3O6/c25-20(26)12-11-19(24(34)35)28-22(32)18-9-6-13-29(18)23(33)17(15-16-7-2-1-3-8-16)27-21(31)10-4-5-14-30/h1-3,7-8,14,17-20,34-35H,4-6,9-13,15H2,(H,27,31)(H,28,32)/t17-,18-,19-/m0/s1
HET Code:   T16 PubChem:   49867708
DrugBank:   - ChEMBL:   CHEMBL1236128
Molecular Formula:   C23H32BBr2N3O6 Mol. Weight:   615.0751 logP:   1.467
HBD:   4 HBA:   6
#Rotatable Bonds:   14 TPSA:   136.04
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Borylation SER 195 H 19.59 - Boronic Acid
Binding Affinity
-