PDB Entry (4ou1)
PDB ID: 4ou1 Resolution: 1.25 Å Exp. Method: X-RAY DIFFRACTION
PMID: 24591605 DOI: 10.1073/pnas.1323268111
Protein
Protein Name: Indole-3-glycerol phosphate synthase
Uniprot ID/ACC: Q06121 (TRPC_SACS2) Organism: Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) (Sulfolobus solfataricus)
Gene Symbol: trpC Gene ID: 44129825
Protein Class: LYASE
Ligand
Ligand Name:   (2S,3S)-2-(6-methoxynaphthalen-2-yl)-3-methyloxirane
Canonical SMILES:   COc(c1)ccc(c12)cc(cc2)[C@@H]3O[C@H]3C
Standard InChI:   InChI=1S/C14H14O2/c1-9-14(16-9)12-4-3-11-8-13(15-2)6-5-10(11)7-12/h3-9,14H,1-2H3/t9-,14+/m0/s1
HET Code:   2V7 PubChem:   -
DrugBank:   - ChEMBL:   -
Molecular Formula:   C14H14O2 Mol. Weight:   214.09938 logP:   3.3082
HBD:   0 HBA:   2
#Rotatable Bonds:   2 TPSA:   21.76
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Epoxide Opening LYS 210 A 20.64 11.16 Epoxide
Binding Affinity
-