PDB Entry (4itb) |
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PDB ID: 4itb | Resolution: 1.4 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 23589281 | DOI: 10.1074/jbc.M113.460428 | |
Protein |
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Protein Name: Succinate-semialdehyde dehydrogenase | |
Uniprot ID/ACC: B1XMM6 (B1XMM6_SYNP2) | Organism: Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) (Agmenellum quadruplicatum) |
Gene Symbol: SYNPCC7002_A2771 | Gene ID: - |
Protein Class: OXIDOREDUCTASE |
Ligand |
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Ligand Name: Succinic semialdehyde | ||
Canonical SMILES: OC(=O)CCC=O | ||
Standard InChI: InChI=1S/C4H6O3/c5-3-1-2-4(6)7/h3H,1-2H2,(H,6,7) | ||
HET Code: SSN | PubChem: 1112 | |
DrugBank: - | ChEMBL: CHEMBL1615238 | |
Molecular Formula: C4H6O3 | Mol. Weight: 102.03169 | logP: 0.0501 |
HBD: 1 | HBA: 2 | |
#Rotatable Bonds: 3 | TPSA: 54.37 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Hemi(thio)acetalization | CYS 262 | A | 13.1 | 17.62 | Aldehyde |
Binding Affinity |
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