PDB Entry (5c5o)
PDB ID: 5c5o Resolution: 1.5 Å Exp. Method: X-RAY DIFFRACTION
PMID: - DOI: -
Protein
Protein Name: Replicase polyprotein 1ab
Uniprot ID/ACC: P0C6X7 (R1AB_SARS) Organism: Severe acute respiratory syndrome coronavirus (SARS-CoV)
Gene Symbol: rep Gene ID: 1489680
Protein Class: HYDROLASE
Ligand
Ligand Name:   (2S)-3-(1H-imidazol-5-yl)-2-({[(3S,4aR,8aS)-2-(N-phenyl-beta-alanyl)decahydroisoquinolin-3-yl]methyl}amino)propanal
Canonical SMILES:   O=C[C@@H](Cc1cnc[nH]1)NC[C@@H]1C[C@H]2CCCC[C@@H]2CN1C(=O)CCNc1ccccc1
Standard InChI:   InChI=1S/C25H35N5O2/c31-17-23(13-22-14-26-18-29-22)28-15-24-12-19-6-4-5-7-20(19)16-30(24)25(32)10-11-27-21-8-2-1-3-9-21/h1-3,8-9,14,17-20,23-24,27-28H,4-7,10-13,15-16H2,(H,26,29)/t19-,20-,23-,24+/m1/s1
HET Code:   SDJ PubChem:   -
DrugBank:   - ChEMBL:   -
Molecular Formula:   C25H35N5O2 Mol. Weight:   437.27908 logP:   3.0188
HBD:   3 HBA:   5
#Rotatable Bonds:   10 TPSA:   90.12
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Hemi(thio)acetalization CYS 145 A 20.99 12.3 Aldehyde
Binding Affinity
-