PDB Entry (5v0f) |
||
| ||
PDB ID: 5v0f | Resolution: 2.23 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: - | DOI: - | |
Protein |
|
Protein Name: Glyoxalase/bleomycin resistance protein/dioxygenase | |
Uniprot ID/ACC: D1A230 (D1A230_THECD) | Organism: Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / KCTC 9072 / NBRC 15933 / NCIMB 10081 / Henssen B9) |
Gene Symbol: Tcur_4156 | Gene ID: - |
Protein Class: OXIDOREDUCTASE |
Ligand |
||
Ligand Name: Roxarsone | ||
Canonical SMILES: OC1=CC=C(C=C1[N+]([O-])=O)[As](O)(O)=O | ||
Standard InChI: InChI=1S/C6H6AsNO6/c9-6-2-1-4(7(10,11)12)3-5(6)8(13)14/h1-3,9H,(H2,10,11,12) | ||
HET Code: RXO | PubChem: 5104 | |
DrugBank: DB11458 | ChEMBL: CHEMBL1321154 | |
Molecular Formula: C6H6AsNO6 | Mol. Weight: 262.9411 | logP: -1.1386 |
HBD: 3 | HBA: 4 | |
#Rotatable Bonds: 2 | TPSA: 120.9 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Nucleophilic Addition to a Double Bond | CYS 99 | A | 43.91 | 8.79 | Arsenic Acid | |
Nucleophilic Addition to a Double Bond | CYS 98 | A | 93.58 | - | Arsenic Acid |
Binding Affinity |
||
- |